Why does it matter to predict protein structure?
Jul 23, 2019 · Protein structure prediction is a hot research topic that currently has limited applications, but is certain to have more in the future. If anything, it has only got more interesting over the last 50 …
Protein structure prediction from amino acids sequence
Jun 6, 2020 · The problem of protein folding is known as Levinthal's paradox: a typical protein of a few hundreds amino-acids can fold into an astronomically big number of configurations, all of them …
What are the applications of predicting the structure of proteins?
Mar 7, 2018 · For structure-based drug design the three-dimensional structure of the protein needs to be determined experimentally by using either x-ray crystallography or nuclear magnetic resonance …
How to use swiss-mod to predict the secondary structure and 3D ...
Dec 2, 2015 · I'm trying to predict the protein secondary and 3-D structure for the sequence [Q1NN20] and need some help getting the ball rolling. I'm getting confused with how and when to use Jpred, …
Export AlphaFold Server file and visualize on PyMol
Jul 19, 2024 · I am currently working with AlphaFold Server, which is Google DeepMind's public access release of AlphaFold3, a model for biomolecule structure prediction. I am using it in order to predict …
First pass protein structure prediction - Biology Stack Exchange
I'm working with a protein that doesn't have any homology to other proteins so it will likely require ab initio structure prediction. However, since I don't work for a structure prediction lab and ...
Can VMD change its cartoon representation for secondary structure ...
Jan 30, 2018 · Explore related questions proteins protein-structure structure-prediction See similar questions with these tags.
How hard it is to determine a 3d structure of a protein?
Jun 22, 2017 · There is also computational structure prediction, which only needs a powerful computer. However, unless your protein is very similar to one with a known structure it will probably not work …
Chemical structure prediction - Biology Stack Exchange
Apr 30, 2017 · I'd like to do chemical structure prediction using a known molecule formulas. I'm familiar with de novo protein structure prediction, but are there any programs which will go from formula to …
bioinformatics - Coordinates of amino acids in a protein sequence ...
May 25, 2016 · In PDB format, the coordinates of each of the atoms are available. Are the coordinates for the amino acids available separately? As in say a protein sequence consisting of a chain of amino …